PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0958s0170.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 258aa    MW: 29879 Da    PI: 6.0644
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0958s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.66.8e-4271293128
                     NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                             pGfrFhPt++el+++yL+k v+g+++   ++i  ++iy++ePwdLp  +k +e+ewyf ++r+       r++r+t++gyWkatg+d
  SapurV1A.0958s0170.1.p   7 PGFRFHPTEQELLDFYLTKAVSGQDMV--DIIGFLNIYNHEPWDLPGLAKIGEREWYFLVHREAIF---GRPRRTTEKGYWKATGSD 88 
                             9***********************954..589**************8888899********98876...59**************** PP

                     NAM  90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             +++ ++   ++l g kktLvfy+grap+g+ktdWvm+eyrl
  SapurV1A.0958s0170.1.p  89 RPIRCSmdLKRLLGHKKTLVFYRGRAPRGSKTDWVMNEYRL 129
                             ****98766778***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-475147IPR003441NAC domain
PROSITE profilePS5100549.0345147IPR003441NAC domain
PfamPF023652.6E-237129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MEFDELPGFR FHPTEQELLD FYLTKAVSGQ DMVDIIGFLN IYNHEPWDLP GLAKIGEREW  60
YFLVHREAIF GRPRRTTEKG YWKATGSDRP IRCSMDLKRL LGHKKTLVFY RGRAPRGSKT  120
DWVMNEYRLP GNFFLSKEMV LCKVYRKATP LKVLEQRAAM EETARAPPPN VTSSSPPITQ  180
ENFSSYEQPQ SFNKLLLEQN NVVHRVEGVA AIEEEEEDDR TGYPSQIVGA VPIRELYYEL  240
QSPKPVLDWS LDSFWLN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-38214712168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011022209.11e-148PREDICTED: NAC domain-containing protein 100-like
TrEMBLB9H6891e-148B9H689_POPTR; Uncharacterized protein
STRINGPOPTR_0005s10610.11e-147(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.13e-83NAC domain containing protein 36